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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
gene expression
234
candidate regulatory elements
146
target gene predictions
117
chromatin state
89
differential activity
33
accessible chromatin
25
variant allelic effects
20
eQTL
13
histone modifications
12
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
336
September, 2022
245
February, 2021
140
September, 2023
47
March, 2023
35
May, 2021
22
June, 2020
21
August, 2021
20
May, 2020
13
March, 2020
11
February, 2020
11
November, 2021
10
February, 2024
10
January, 2021
7
August, 2018
6
January, 2022
4
August, 2017
4
March, 2024
2
April, 2019
2
January, 2020
2
October, 2022
1
February, 2023
1
January, 2018
Available data
561
bed bed3+
329
tsv
113
bed bed9
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
950
Homo sapiens
Biosample type
490
tissue
383
primary cell
73
cell line
4
in vitro differentiated cells
Organ
783
epithelium
616
kidney
445
brain
413
connective tissue
359
musculature of body
302
lung
278
intestine
238
vasculature
235
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
135
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
787
AMP
140
KPMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
591
hg19
133
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
950 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
accessible chromatin
variant allelic effects
eQTL
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
stomach
1
40
21
19
3
1
1
kidney
7
29
14
15
1
1
1
2
1
right kidney
20
10
10
1
islet of Langerhans
11
1
3
2
1
13
1
2
2
2
2
renal cortex interstitium
20
9
9
1
+ See 25 more…
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
1
pancreatic ductal cell
3
3
3
1
1
2
1
glomerular visceral epithelial cell
5
2
1
1
1
pancreatic acinar cell
3
3
3
1
+ See 77 more…
cell line
EndoC_BH1
8
1
3
7
1
HEK293
3
1
1
1
1
2
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
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