Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 50target gene predictions
  • 35candidate regulatory elements
  • 33differential activity
  • 24accessible chromatin
  • 17chromatin state
  • 15gene expression
  • 14histone modifications
  • 13binding sites
  • 8eQTL
  • 4variant allelic effects
  • 3Fine-mapped variants
  • 1caQTL
Date released
  • 46September, 2022
  • 43July, 2026
  • 30May, 2026
  • 25February, 2021
  • 14February, 2024
  • 12May, 2024
  • 10August, 2021
  • 10March, 2020
  • 5June, 2020
  • 4March, 2023
  • 3August, 2017
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 1January, 2020
  • 1January, 2022
  • 1July, 2020
  • 1November, 2021
  • 1October, 2022
Available data
  • 161bed bed3+
  • 27tsv
  • bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 217Homo sapiens
Collection Tags
  • 42EpiMap
  • 32DGA
  • 30pyxis
  • 28HDMA
  • 20AMP
  • 17ChIP-Atlas
  • 15ENCODE-rE2G
  • 13 T2DKP
  • 12FNIH_projects-liver
  • 11ENCODE
  • 11T2DKP
  • 5GTEx
  • 4HPAP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 115primary cell
  • 63tissue
  • 31cell line
  • 8in vitro differentiated cells
Organ
  • 3365blood
  • 2871vasculature
  • 2853bodily fluid
  • 2838blood vessel
  • 2658vein
  • 882brain
  • 776epithelium
  • 720kidney
  • 466heart
  • 463connective tissue
  • 431lung
  • 370musculature of body
  • 347intestine
  • 291skin of body
  • 262pancreas
  • 230limb
  • 223large intestine
  • 217liver
  • 213embryo
  • 171extraembryonic component
  • 137adipose tissue
  • 135stomach
  • 125eye
  • 111muscle organ
  • 101mammary gland
  • 96adrenal gland
  • 96bone element
  • 95placenta
  • 95small intestine
  • 92thymus
  • 92uterus
  • 87prostate gland
  • 79artery
  • 70ureter
  • 64penis
  • 63gonad
  • 62lymph node
  • 62spleen
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 31ovary
  • 31testis
  • 24lymphoid tissue
  • 23nerve
  • 21mouth
  • 18lymphatic vessel
  • 16skeleton
  • 15breast
  • 14bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 11bone marrow
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 216AMP
  • 1ENCODE
Genome assembly (visualization)
  • 122hg19
  • 92GRCh38
  • 2hg18
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

217 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
differential activity
accessible chromatin
chromatin state
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte824518412
hepatic stellate cell32421111
endothelial cell of hepatic sinusoid46
endothelial cell1141
cholangiocyte141
tissue
liver12132912171
right lobe of liver621113
left lobe of liver1
cell line
HepG2521253
HuH-7211111
HuH-7.5211
hepatic stellate cell11
in vitro differentiated cells
hepatocyte221
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego