Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
71
target gene predictions
51
gene expression
41
chromatin state
33
differential activity
18
accessible chromatin
16
eQTL
9
variant allelic effects
7
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
111
September, 2022
57
February, 2021
47
March, 2023
35
May, 2021
11
November, 2021
10
January, 2021
10
March, 2020
9
February, 2024
8
August, 2021
7
August, 2018
7
June, 2020
5
January, 2022
4
August, 2017
4
May, 2020
3
February, 2020
2
January, 2020
2
March, 2024
1
April, 2019
1
February, 2023
1
January, 2018
Available data
252
bed bed3+
78
tsv
bigWig
36
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
335
Homo sapiens
Biosample type
206
tissue
93
primary cell
33
cell line
3
in vitro differentiated cells
Organ
783
epithelium
616
kidney
445
brain
413
connective tissue
359
musculature of body
302
lung
278
intestine
238
vasculature
235
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
135
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
312
AMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
240
hg19
56
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
335 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
differential activity
accessible chromatin
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
stomach
40
21
1
19
3
1
1
islet of Langerhans
1
11
3
2
13
1
1
2
2
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
3
2
1
1
1
1
endocrine pancreas
7
4
4
+ See 5 more…
primary cell
pancreatic ductal cell
3
3
3
1
1
2
1
pancreatic acinar cell
3
3
3
1
pancreatic delta cell
3
3
3
1
pancreatic alpha cell
2
3
3
1
pancreatic beta cell
2
3
3
1
+ See 16 more…
cell line
EndoC_BH1
1
8
3
7
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download