Experiment Matrix

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BIOSAMPLE

	ASSAY
401 results Clear Filters	ATAC-seq	ChIP-seq	pCHi-C	total RNA-seq	RRBS	Hi-C	snATAC-seq	MeRIP-seq	WGBS	single cell RNA-seq	STARR-seq	CRISPR genome editing followed by DNA sequencing	Capture-C	DNase-seq	snDrop-seq	DNAme array
tissue
islet of Langerhans	34	2		8	1	2	3	4
brain	1	6			1
kidney		1			1		4
liver		2	1		1					1
pancreas			1		1	1	2
skeletal muscle tissue					2		1			1
Ammon's horn			1	1
acetabular part of hip bone	1			1
adipose tissue	1		1
heart						1				1
heart left ventricle			1		1
ilium	1			1
ischium	1			1
pubis	1			1
right atrium auricular region		1		1
right lobe of liver				1					1
thymus			2
tibial artery		1		1
C1 segment of cervical spinal cord				1
adipose tissue(adipose white tissue)	1
adrenal gland			1
amygdala				1
anterior cingulate cortex				1
aorta			1
ascending aorta				1
bladder (urinary bladder)			1
body of pancreas				1
caudate nucleus				1
cerebellum				1
cerebellum (Hemisphere)				1
coronary artery				1
dorsolateral prefrontal cortex			1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))				1
esophagus			1
frontal cortex				1
gastric (mucosa of stomach)			1
gastrocnemius medialis				1
heart right ventricle			1
hypothalamus				1
kidney (cortex)															1
kidney (medulla)															1
left ventricle myocardium				1
lung			1
nucleus accumbens				1
omental fat pad				1
ovary			1
pericardium					1
planum polare		1
psoas muscle			1
putamen				1
retina				1
right cardiac atrium			1
sigmoid colon			1
small intestine			1
spleen			1
subcutaneous adipose tissue				1
substantia nigra				1
thoracic aorta		1
tibial nerve				1
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell	22	2	1	1
CD4-positive, alpha-beta memory T cell	22
macrophage	11		1
pancreatic alpha cell						1			6
endothelial cell of umbilical vein		4				1
monocyte		1	1	1												1
gabaergic neuron	3
glutamatergic neuron	3
microglial cell/astrocyte	3
neutrophil		1	1	1
oligodendrocyte	3
CD4-positive, alpha-beta T cell			2
hepatocyte		1			1
pancreatic beta cell		1				1
peripheral blood mononuclear cell							2
B cell			1
CD8-positive, alpha-beta T cell			1
activated CD4-positive, alpha-beta T cell			1
adult endothelial progenitor cell			1
alternatively activated macrophage			1
cardiac fibroblast					1
cardiac muscle cell					1
chondrocytes						1
choroid plexus epithelial cell					1
epithelial cell of proximal tubule					1
erythroblast			1
inflammatory macrophage			1
kidney epithelial cell					1
kidney glomerular epithelial cell														1
kidney tubule cell														1
megakaryocyte			1
mesenchymal stem cell		1
naive B cel			1
naive thymus-derived CD8-positive, alpha-beta T cell			1
osteoblast			1
pancreatic acinar cell						1
pancreatic cell										1
renal cortical epithelial cell					1
retinal pigment epithelial cell					1
skeletal muscle cell					1
skeletal muscle myoblast					1
skeletal muscle satellite cell		1
in vitro differentiated cells
neural progenitor cell	10	8
embryonic stem cell		11	1	5
adipocyte	5	1		1									1
cardiomyocytes (cardiac muscle cell)	1		2			2				2
Pancreatic progenitors (progenitor cell of endocrine pancreas)	4
cardiac precursors (cardiac muscle cell)	1					1
immature adipocyte	1			1
lymphocyte of B lineage (iPSC)			1			1
preadipocyte	1			1
Posterior foregut		1
definitive endodermal cell		1
hepatocyte		1
osteoblast													1
pancreatic endoderm		1
primitive gut cell		1
cell line
HepG2	1	25	2			1					2
EndoC_BH1								6				3
Panc1		5
GM12878		4
HEK293T											2
RCC 7860 vector		1	1
MCF-7			1
RCC 7860 HIF1a re-expression		1
RCC 7860 HIF2a over-expression		1
RCC 7860 VHL			1
fibroblast cell line			1
stem cell
hESC		1
mesenchymal stem cell			1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

files.file_type!

replication_type!

401 results