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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1104target gene predictions
  • 977histone modifications
  • 942chromatin state
  • 817binding sites
  • 680gene expression
  • 385accessible chromatin
  • 189eQTL
  • 172differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2576February, 2021
  • 2507September, 2022
  • 340February, 2024
  • 289June, 2020
  • 286September, 2023
  • 237May, 2021
  • 128March, 2020
  • 108August, 2021
  • 102January, 2022
  • 102May, 2020
  • 101October, 2022
  • 70March, 2023
  • 64February, 2020
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 33November, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 13February, 2023
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5834bed bed3+
  • 3576tsv
  • 869bed bed9
  • bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9868Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 966ENCODE
  • 447DGA
  • 380T1D
  • 281KPMP
  • 206BLUEPRINT
  • 185AMP
  • 1744DN
  • 151GTEx
  • 129 T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 69CMDGA
  • 55HPAP
  • 43STARNET
  • 36T2DKP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5175tissue
  • 2300cell line
  • 1950primary cell
  • 441in vitro differentiated cells
  • 4stem cell
Organ
  • 2878vasculature
  • 2855bodily fluid
  • 2844blood
  • 2822blood vessel
  • 2656vein
  • 723epithelium
  • 616kidney
  • 435brain
  • 394connective tissue
  • 355musculature of body
  • 295lung
  • 264intestine
  • 228heart
  • 227limb
  • 208embryo
  • 206pancreas
  • 189skin of body
  • 163large intestine
  • 140extraembryonic component
  • 136liver
  • 108stomach
  • 91adipose tissue
  • 79bone element
  • 79mammary gland
  • 79small intestine
  • 79uterus
  • 76prostate gland
  • 73eye
  • 70placenta
  • 68artery
  • 63penis
  • 61adrenal gland
  • 61lymph node
  • 61ureter
  • 47gonad
  • 47thymus
  • 42spinal cord
  • 41esophagus
  • 32spleen
  • 26testis
  • 24lymphoid tissue
  • 23nerve
  • 20lymphatic vessel
  • 20ovary
  • 20thyroid gland
  • 19mouth
  • 13bronchus
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 9541AMP
  • 281KPMP
  • 32T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6215hg19
  • 1416GRCh38
  • 4hg18
files.file_type!
  • bigWig
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

9872 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201211322
stomach4019119131
brain291631811121
kidney291421517111
cell line
HeLa-S355431
A549211811821
H1-hESC13811281
K5627221721
MCF-7952531
primary cell
monocyte28611524121
common myeloid progenitor, CD34-positive271313
CD8-positive, alpha-beta T cell723013
B cell17982
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
neural progenitor cell55154710
hematopoietic multipotent progenitor cell1910110111
adipocyte4216113
embryonic stem cell11516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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