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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 942chromatin state
  • 876candidate regulatory elements
  • 817binding sites
  • 521target gene predictions
  • 385accessible chromatin
  • 186eQTL
  • 137variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 6gene expression
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2399February, 2021
  • 842September, 2022
  • 289June, 2020
  • 286May, 2021
  • 274February, 2024
  • 117March, 2020
  • 115September, 2023
  • 111November, 2021
  • 102January, 2022
  • 102May, 2020
  • 101October, 2022
  • 55August, 2021
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 33November, 2022
  • 28January, 2021
  • 26February, 2020
  • 15March, 2023
  • 13February, 2023
  • 8April, 2019
  • 7January, 2020
  • 7May, 2019
  • 5October, 2019
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
Available data
  • 4414bed bed3+
  • 2903tsv
  • 869bed bed9
  • bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7732Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 938ENCODE
  • 833EpiMap
  • 378DGA
  • 286T1D
  • 187AMP
  • 1744DN
  • 168BLUEPRINT
  • 143T2DKP
  • 110KPMP
  • 108 T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 96GTEx
  • 69CMDGA
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4171tissue
  • 1969cell line
  • 1276primary cell
  • 314in vitro differentiated cells
  • 4stem cell
Organ
  • 2807bodily fluid
  • 2801blood
  • 2799vasculature
  • 2763blood vessel
  • 2652vein
  • 415epithelium
  • 307brain
  • 290connective tissue
  • 264kidney
  • 217musculature of body
  • 165intestine
  • 161lung
  • 149embryo
  • 142heart
  • 133limb
  • 129skin of body
  • 114pancreas
  • 103large intestine
  • 93liver
  • 77extraembryonic component
  • 72uterus
  • 66stomach
  • 65adipose tissue
  • 56mammary gland
  • 54eye
  • 51prostate gland
  • 50artery
  • 47bone element
  • 46lymph node
  • 44penis
  • 44small intestine
  • 39placenta
  • 38adrenal gland
  • 35ureter
  • 31gonad
  • 27esophagus
  • 26spinal cord
  • 26thymus
  • 20spleen
  • 17testis
  • 15nerve
  • 14lymphatic vessel
  • 13lymphoid tissue
  • 13ovary
  • 13thyroid gland
  • 12pituitary gland
  • 10bronchus
  • 10mouth
  • 9bone marrow
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 4skeleton
  • 2nose
Project
  • 7465AMP
  • 111ENCODE
  • 110KPMP
  • 32T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4783hg19
  • 1527GRCh38
  • 4hg18
files.file_type!
  • bigWig
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7736 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
candidate regulatory elements
binding sites
target gene predictions
accessible chromatin
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
sQTL
gene expression
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
stomach11921231
heart121181122
brain318131121
kidney215151111
cell line
HeLa-S332152
H1-hESC112381
K5621712171
A5491183211
breast cancer cell119
primary cell
monocyte861224121
CD8-positive, alpha-beta T cell30175
common myeloid progenitor, CD34-positive13141
CD14-positive monocyte4415
macrophage3319311
in vitro differentiated cells
neural progenitor cell1541110
hematopoietic multipotent progenitor cell110911
adipocyte162143
embryonic stem cell15116
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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