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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 74ChIP-seq
Assay category
  • 74DNA binding
Target of assay
  • 320control
  • 148histone
  • 148histone modification
  • 74broad histone mark
  • 74narrow histone mark
  • 18transcription factor
  • 8RNA binding protein
  • 5nucleotide modification
  • 1recombinant protein
Date released
  • 48August, 2017
  • 12May, 2021
  • 5November, 2017
  • 5October, 2017
  • 3October, 2019
  • 1August, 2021
Available data
  • bigWig
  • 420bed narrowPeak
  • 378bam
  • 242bigBed narrowPeak
  • 147tagAlign
  • 118fastq
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 74Homo sapiens
Biosample type
  • 50tissue
  • 19in vitro differentiated cells
  • 4primary cell
  • 1cell line
Organ
  • 28connective tissue
  • 20adipose tissue
  • 12liver
  • 10brain
  • 5pancreas
  • 4musculature of body
  • 2blood vessel
  • 2epithelium
  • 2vasculature
  • 2vein
Project
  • 74AMP
Genome assembly (visualization)
  • 1GRCh38
Lab
  • 64AMP-T2D consortium
  • 10Kyle Gaulton, UCSD
Audit category:
  • 1missing controlled_by
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

74 results

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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue20
liver12
brain5
islet of Langerhans4
skeletal muscle tissue4
in vitro differentiated cells
embryonic stem cell10
adipocyte8
neural progenitor cell1
primary cell
endothelial cell of umbilical vein2
naive thymus-derived CD4-positive, alpha-beta T cell1
neutrophil1
cell line
Panc11
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