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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 315ChIP-seq
  • 5MeRIP-seq
Assay category
  • 315DNA binding
Target of assay
  • 320control
  • 148histone
  • 148histone modification
  • 74broad histone mark
  • 74narrow histone mark
  • 18transcription factor
  • 8RNA binding protein
  • 5nucleotide modification
  • 1recombinant protein
Date released
  • 55November, 2017
  • 49August, 2017
  • 39October, 2019
  • 29October, 2018
  • 23May, 2019
  • 23May, 2020
  • 21December, 2017
  • 14April, 2019
  • 12August, 2021
  • 8February, 2018
  • 8June, 2019
  • 6May, 2021
  • 6November, 2018
  • 6September, 2017
  • 5November, 2020
  • 4December, 2018
  • 4January, 2019
  • 3February, 2021
  • 3October, 2017
  • 2November, 2019
Available data
  • 306bam
  • 168fastq
  • 68tagAlign
  • bigWig
  • 9bed bed3+
  • 3tsv
Organism
  • 319Homo sapiens
Biosample type
  • 187tissue
  • 70cell line
  • 37in vitro differentiated cells
  • 25primary cell
  • 1stem cell
Organ
  • 95liver
  • 53pancreas
  • 35connective tissue
  • 28epithelium
  • 25brain
  • 24adipose tissue
  • 20blood vessel
  • 20heart
  • 20vasculature
  • 17limb
  • 12kidney
  • 11nerve
  • 9artery
  • 8spleen
  • 7embryo
  • 6blood
  • 6bodily fluid
  • 6musculature of body
  • 2vein
  • 1eye
Project
  • 320AMP
Genome assembly (visualization)
  • 9GRCh38
  • 9hg19
Lab
  • 306AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Rohit N. Kulkarni, M.D., Ph.D.
  • 4Bing Ren, UCSD
Audit category:
  • 15inconsistent ontology term
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

320 results

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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver43
islet of Langerhans132
tibial nerve11
subcutaneous adipose tissue10
body of pancreas9
cell line
HepG247
GM128786
Panc16
EndoC_BH123
smooth muscle cell of the coronary artery2
in vitro differentiated cells
adipocyte8
neural progenitor cell7
embryonic stem cell6
pancreatic endoderm5
Hepatic endoderm2
primary cell
pancreatic alpha cell6
pancreatic beta cell6
cardiac fibroblast2
endothelial cell of umbilical vein2
epithelial cell of proximal tubule2
stem cell
hESC1
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