Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 148ChIP-seq
Assay category
  • 148DNA binding
Target of assay
  • 320control
  • 148histone
  • 148histone modification
  • 74broad histone mark
  • 74narrow histone mark
  • 18transcription factor
  • 8RNA binding protein
  • 5nucleotide modification
  • 1recombinant protein
Date released
  • 76August, 2017
  • 27October, 2019
  • 24May, 2021
  • 13November, 2017
  • 6October, 2017
  • 1August, 2021
  • 1December, 2017
Available data
  • bigWig
  • 851bed narrowPeak
  • 785bam
  • 391bigBed narrowPeak
  • 321tagAlign
  • 230fastq
  • 65bed broadPeak
  • 30bigBed broadPeak
  • 25bed bed3+
  • 1tagAlign bed3+
Organism
  • 148Homo sapiens
Biosample type
  • 106tissue
  • 34in vitro differentiated cells
  • 7primary cell
  • 1cell line
Organ
  • 43connective tissue
  • 30adipose tissue
  • 21brain
  • 20liver
  • 9pancreas
  • 6musculature of body
  • 4gonad
  • 4ovary
  • 3blood vessel
  • 3epithelium
  • 3vasculature
  • 3vein
  • 2eye
  • 1embryo
  • 1limb
  • 1lymph node
Project
  • 148AMP
Genome assembly (visualization)
  • 3GRCh38
  • 2hg19
Lab
  • 128AMP-T2D consortium
  • 20Kyle Gaulton, UCSD
Audit category:
  • 2missing controlled_by
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

148 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue30
islet of Langerhans29
liver20
brain6
cingulate gyrus6
in vitro differentiated cells
embryonic stem cell20
adipocyte12
neural progenitor cell1
pancreatic endoderm1
primary cell
endothelial cell of umbilical vein3
naive thymus-derived CD4-positive, alpha-beta T cell2
monocyte1
neutrophil1
cell line
Panc11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego