Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 74ChIP-seq
Assay category
  • 74DNA binding
Target of assay
  • 320control
  • 148histone
  • 148histone modification
  • 74broad histone mark
  • 74narrow histone mark
  • 18transcription factor
  • 8RNA binding protein
  • 5nucleotide modification
  • 1recombinant protein
Date released
  • 28August, 2017
  • 24October, 2019
  • 12May, 2021
  • 8November, 2017
  • 1December, 2017
  • 1October, 2017
Available data
  • bigWig
  • 429bed narrowPeak
  • 405bam
  • 174tagAlign
  • 149bigBed narrowPeak
  • 110fastq
  • 29bed broadPeak
  • 14bigBed broadPeak
  • 13bed bed3+
  • 1tagAlign bed3+
Organism
  • 74Homo sapiens
Biosample type
  • 56tissue
  • 15in vitro differentiated cells
  • 3primary cell
Organ
  • 15connective tissue
  • 11brain
  • 10adipose tissue
  • 8liver
  • 4gonad
  • 4ovary
  • 4pancreas
  • 2eye
  • 2musculature of body
  • 1blood vessel
  • 1embryo
  • 1epithelium
  • 1limb
  • 1lymph node
  • 1vasculature
  • 1vein
Project
  • 74AMP
Genome assembly (visualization)
  • 2GRCh38
  • 2hg19
Lab
  • 64AMP-T2D consortium
  • 10Kyle Gaulton, UCSD
Audit category:
  • 1missing controlled_by
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

74 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
islet of Langerhans25
subcutaneous abdominal adipose tissue10
liver8
cingulate gyrus3
skeletal muscle tissue2
in vitro differentiated cells
embryonic stem cell10
adipocyte4
pancreatic endoderm1
primary cell
endothelial cell of umbilical vein1
monocyte1
naive thymus-derived CD4-positive, alpha-beta T cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego