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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
643
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
309
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
168
July, 2018
167
February, 2023
97
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
94
bam
94
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
15
bed bed3+
Organism
94
Homo sapiens
Biosample type
48
tissue
43
in vitro differentiated cells
3
stem cell
Organ
63
liver
19
epithelium
13
embryo
Project
94
AMP
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
94
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
files.file_type!
csv
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
94 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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stem cell
hESC
3
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