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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
32
ChIP-seq
4
total RNA-seq
2
DNase-seq
2
single cell RNA-seq
1
pCHi-C
Assay category
39
DNA accessibility
32
DNA binding
6
Transcription
Target of assay
24
histone
24
histone modification
14
broad histone mark
10
narrow histone mark
7
control
1
RNA binding protein
1
transcription factor
Date released
February, 2021
35
February, 2023
30
October, 2019
5
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
June, 2019
1
March, 2020
Available data
60
bed narrowPeak
34
bam
27
bigWig
23
bigBed narrowPeak
7
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
78
Homo sapiens
Biosample type
76
tissue
2
primary cell
Organ
910
pancreas
786
liver
472
epithelium
292
heart
265
kidney
256
brain
211
connective tissue
163
vasculature
159
blood vessel
104
adipose tissue
84
limb
73
artery
69
blood
69
bodily fluid
54
eye
53
musculature of body
43
nerve
37
embryo
25
spleen
22
vein
20
lung
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
78
AMP
Genome assembly (visualization)
62
GRCh38
27
hg19
Lab
78
AMP-T2D consortium
files.file_type!
csv
month_released!
February, 2021
June, 2019
BIOSAMPLE
ASSAY
78 results
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ATAC-seq
ChIP-seq
total RNA-seq
DNase-seq
single cell RNA-seq
pCHi-C
tissue
coronary artery
36
5
1
tibial artery
1
23
1
2
islet of Langerhans
4
pulmonary artery
2
ovary
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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