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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
8
snATAC-seq
2
ATAC-seq
Assay category
43
DNA binding
10
DNA accessibility
Target of assay
37
transcription factor
4
RNA binding protein
4
chromatin remodeller
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
January, 2019
15
November, 2018
8
January, 2021
2
October, 2019
1
January, 2018
Available data
43
bam
42
fastq
41
bigWig
40
bed narrowPeak
39
bigBed narrowPeak
1
tagAlign
Organism
53
Homo sapiens
Biosample type
43
cell line
8
primary cell
2
tissue
Organ
890
pancreas
785
liver
670
connective tissue
490
adipose tissue
472
epithelium
357
heart
349
kidney
285
brain
201
vasculature
195
blood vessel
151
bone element
122
limb
106
artery
96
musculature of body
51
blood
51
bodily fluid
43
nerve
37
embryo
30
eye
22
vein
20
lung
18
spleen
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
45
AMP
8
T1D
Genome assembly (visualization)
41
hg19
40
GRCh38
Lab
45
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.file_type!
csv
month_released!
February, 2023
January, 2019
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
42
1
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
1
pituitary gland
1
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