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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
149
ChIP-seq
100
ATAC-seq
1
pCHi-C
Assay category
190
Transcription
149
DNA binding
100
DNA accessibility
Target of assay
106
histone
106
histone modification
55
narrow histone mark
51
broad histone mark
40
control
3
RNA binding protein
3
transcription factor
Date released
643
February, 2021
411
August, 2017
406
November, 2017
396
May, 2021
341
May, 2020
302
October, 2019
227
August, 2021
200
May, 2022
183
June, 2019
169
February, 2023
168
July, 2018
99
May, 2019
94
December, 2017
87
November, 2018
83
July, 2019
76
October, 2018
72
September, 2018
61
November, 2019
59
September, 2020
56
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
382
bam
342
bigWig
189
tsv
109
bed narrowPeak
82
bigBed narrowPeak
50
tagAlign
Organism
440
Homo sapiens
Biosample type
287
tissue
152
primary cell
1
cell line
Organ
194
liver
50
blood vessel
50
vasculature
28
brain
heart
7
limb
7
musculature of body
5
artery
5
epithelium
5
kidney
2
pancreas
Project
395
AMP
45
T1D
Genome assembly (visualization)
342
hg19
288
GRCh38
Lab
395
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
11
inconsistent ontology term
files.file_type!
csv
organ_slims!
heart
ovary
BIOSAMPLE
ASSAY
440 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
tissue
liver
143
50
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 4 more…
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
kidney epithelial cell
5
B cell
2
2
+ See 25 more…
cell line
HepG2
1
See all biosamples
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