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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
single cell RNA-seq
21
snATAC-seq
20
ATAC-seq
20
total RNA-seq
Assay category
54
Transcription
41
DNA accessibility
Date released
555
February, 2021
373
May, 2021
341
May, 2020
279
October, 2019
256
August, 2021
198
June, 2019
124
August, 2017
118
July, 2018
115
May, 2019
107
February, 2023
95
July, 2019
95
May, 2022
82
November, 2017
80
April, 2019
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
October, 2018
15
May, 2023
10
November, 2020
6
October, 2017
5
March, 2023
4
December, 2019
4
March, 2019
3
January, 2018
1
April, 2018
1
August, 2022
Available data
54
zippedFastqFolder
38
bed narrowPeak
24
bam
fastq
20
bigWig
txt
1
bed bed3+
Organism
95
Homo sapiens
Biosample type
54
primary cell
41
tissue
Organ
epithelium
80
pancreas
40
liver
1
musculature of body
Project
54
HPAP
41
AMP
Genome assembly (visualization)
20
hg19
Lab
54
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
1
AMP-T2D consortium
files.file_type!
fastq
txt
month_released!
September, 2017
organ_slims!
epithelium
BIOSAMPLE
ASSAY
95 results
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single cell RNA-seq
snATAC-seq
ATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
tissue
liver
20
20
skeletal muscle tissue
1
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