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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
6
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
1
control
1
narrow histone mark
Date released
604
February, 2021
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
176
May, 2022
124
August, 2017
118
July, 2018
96
July, 2019
94
February, 2023
82
November, 2017
80
April, 2019
70
May, 2019
61
November, 2019
60
March, 2020
47
September, 2023
40
May, 2024
22
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
fastq
15
bam
14
tagAlign
13
bigWig
12
bed narrowPeak
6
bigBed narrowPeak
3
bed broadPeak
1
hic
Organism
7
Homo sapiens
Biosample type
6
tissue
2
cell line
2
stem cell
1
primary cell
Organ
6
brain
Project
6
AMP
4
community
1
ITG
Genome assembly (visualization)
1
GRCh38
Lab
6
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
files.file_type!
fastq
lab.title!
Stephen Parker, UMich
organ_slims!
vasculature
BIOSAMPLE
ASSAY
11 results
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Clear Filters
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
brain
6
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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