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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
5
WGBS
2
DNase-seq
2
RRBS
Assay category
55
DNA binding
7
DNA methylation
2
DNA accessibility
Target of assay
96
histone
96
histone modification
broad histone mark
36
narrow histone mark
19
control
Date released
670
February, 2021
341
May, 2020
323
May, 2021
306
August, 2021
259
October, 2019
210
June, 2019
May, 2022
126
February, 2023
118
July, 2018
108
July, 2019
64
August, 2017
64
March, 2020
62
May, 2019
55
November, 2019
47
September, 2023
43
April, 2019
40
November, 2017
25
February, 2020
20
May, 2024
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
15
May, 2023
10
December, 2019
8
October, 2018
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
2
October, 2017
1
August, 2022
Available data
fastq
233
bam
211
bigWig
89
tsv
86
bed narrowPeak
40
tagAlign
27
bed bed3+
24
bigBed narrowPeak
19
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
64
Homo sapiens
Biosample type
57
tissue
6
in vitro differentiated cells
1
primary cell
Organ
25
connective tissue
19
adipose tissue
14
liver
12
musculature of body
12
pancreas
Project
64
AMP
Genome assembly (visualization)
9
hg19
Lab
64
AMP-T2D consortium
files.file_type!
fastq
lab.title!
Struan F.A. Grant, CHOP
month_released!
May, 2022
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ChIP-seq
WGBS
DNase-seq
RRBS
tissue
subcutaneous abdominal adipose tissue
16
3
liver
11
2
islet of Langerhans
12
skeletal muscle tissue
10
2
right lobe of liver
1
in vitro differentiated cells
adipocyte
6
primary cell
skeletal muscle myoblast
1
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