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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
98
Transcription
60
DNA accessibility
41
DNA methylation
Date released
134
May, 2022
47
September, 2023
18
September, 2020
October, 2022
Available data
fastq
153
zippedFastqFolder
10
bigWig
6
tsv
Organism
199
Homo sapiens
Biosample type
152
primary cell
47
tissue
Organ
80
epithelium
80
pancreas
47
kidney
Project
152
HPAP
47
KPMP
Lab
2666
AMP-T2D consortium
319
Kyle Gaulton, UCSD
152
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
files.file_type!
fastq
month_released!
November, 2017
October, 2022
BIOSAMPLE
ASSAY
199 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
51
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
tissue
kidney
47
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