Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
6
total RNA-seq
2
DNase-seq
1
ATAC-seq
1
RRBS
Assay category
35
DNA binding
6
Transcription
3
DNA accessibility
1
DNA methylation
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
2
July, 2019
1
February, 2020
Available data
43
bam
32
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
6
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
45
Homo sapiens
Biosample type
44
tissue
1
primary cell
Organ
583
connective tissue
pancreas
447
adipose tissue
393
heart
354
kidney
326
liver
267
epithelium
230
vasculature
227
blood vessel
183
brain
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
45
AMP
Genome assembly (visualization)
33
hg19
32
GRCh38
Lab
45
AMP-T2D consortium
files.file_type!
fastq
month_released!
November, 2017
organ_slims!
pancreas
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
RRBS
tissue
tibial nerve
35
5
2
1
pericardium
1
primary cell
pericardium fibroblast
1
Download