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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
20
DNase-seq
5
total RNA-seq
1
ATAC-seq
1
pCHi-C
Assay category
35
DNA binding
21
DNA accessibility
5
Transcription
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
42
October, 2019
18
June, 2019
1
February, 2020
1
March, 2020
Available data
60
bam
49
bigWig
45
bed narrowPeak
44
bigBed narrowPeak
20
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
6
tsv
Organism
62
Homo sapiens
Biosample type
62
tissue
Organ
583
connective tissue
475
pancreas
447
adipose tissue
393
heart
354
kidney
326
liver
267
epithelium
230
vasculature
227
blood vessel
183
brain
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
62
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
month_released!
November, 2017
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
2
5
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
gastric (mucosa of stomach)
1
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