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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
8
snATAC-seq
4
total RNA-seq
Assay category
21
DNA accessibility
4
Transcription
Date released
8
February, 2021
8
February, 2023
8
January, 2021
1
January, 2018
Available data
52
bam
49
bed narrowPeak
fastq
42
bigWig
41
bigBed narrowPeak
4
bed bed3
4
txt
Organism
25
Homo sapiens
Biosample type
16
tissue
8
primary cell
1
cell line
Organ
531
connective tissue
424
pancreas
416
adipose tissue
324
kidney
296
heart
268
liver
225
epithelium
161
vasculature
159
bone element
158
blood vessel
121
artery
88
brain
73
limb
61
musculature of body
58
eye
20
lung
19
nerve
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
17
AMP
8
T1D
Genome assembly (visualization)
13
hg19
8
GRCh38
Lab
17
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
fastq
month_released!
November, 2018
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
snATAC-seq
total RNA-seq
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
+ See 7 more…
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
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