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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
single cell RNA-seq
3
Hi-C
1
MPRA
Assay category
5
Transcription
3
3D chromatin structure
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
49
bam
49
bigWig
49
tsv
fastq
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
8
Homo sapiens
Biosample type
8
primary cell
1
cell line
Organ
8
pancreas
7
epithelium
1
connective tissue
Project
6
AMP
3
HPAP
Genome assembly (visualization)
8
hg19
5
GRCh38
Lab
6
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
files.file_type!
fastq
month_released!
June, 2018
BIOSAMPLE
ASSAY
9 results
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single cell RNA-seq
Hi-C
MPRA
primary cell
pancreatic acinar cell
3
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic ductal cell
1
pancreatic stellate cell
1
cell line
MIN6
1
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