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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
235
ChIP-seq
5
WGBS
2
DNase-seq
2
RRBS
Assay category
235
DNA binding
7
DNA methylation
2
DNA accessibility
Target of assay
188
histone
188
histone modification
118
broad histone mark
70
narrow histone mark
42
control
5
RNA binding protein
5
transcription factor
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
0
December, 2018
Available data
436
bam
399
bigWig
fastq
269
bed narrowPeak
169
bigBed narrowPeak
89
tsv
85
tagAlign
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
244
Homo sapiens
Biosample type
224
tissue
14
in vitro differentiated cells
6
primary cell
Organ
53
connective tissue
50
blood vessel
50
vasculature
39
adipose tissue
31
musculature of body
28
brain
26
liver
22
pancreas
21
heart
7
limb
5
artery
5
epithelium
5
kidney
Project
244
AMP
Genome assembly (visualization)
118
hg19
96
GRCh38
Lab
244
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
244 results
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Clear Filters
ChIP-seq
WGBS
DNase-seq
RRBS
tissue
subcutaneous abdominal adipose tissue
36
3
liver
23
2
skeletal muscle tissue
22
2
islet of Langerhans
20
ascending aorta
16
+ See 11 more…
in vitro differentiated cells
adipocyte
14
primary cell
kidney epithelial cell
5
skeletal muscle myoblast
1
See all biosamples
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