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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
12
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
12
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
transcription factor
Date released
662
February, 2021
383
May, 2021
300
October, 2019
284
August, 2021
212
June, 2019
147
May, 2020
136
May, 2022
129
February, 2023
118
July, 2018
115
May, 2019
98
August, 2017
98
July, 2019
82
November, 2017
74
April, 2019
61
March, 2020
60
November, 2019
47
September, 2023
35
May, 2024
24
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
6
October, 2017
5
April, 2018
5
December, 2019
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
0
August, 2020
Available data
58
bam
37
bigWig
36
bed narrowPeak
20
tsv
fastq
2
bedpe bed3+
2
hic
Organism
60
Homo sapiens
Biosample type
40
tissue
15
cell line
5
in vitro differentiated cells
Organ
54
pancreas
15
epithelium
1
adipose tissue
1
connective tissue
Project
60
AMP
Genome assembly (visualization)
58
hg19
56
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
files.file_type!
fastq
organ_slims!
liver
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
12
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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