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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 545total RNA-seq
  • 84RNA microarray
  • 22ATAC-seq
  • 8ChIP-seq
  • 6single cell RNA-seq
  • 3snDrop-seq
  • 2pCHi-C
Assay category
  • 551Transcription
  • 22DNA accessibility
  • 8DNA binding
Target of assay
  • 5transcription factor
  • 3control
Date released
  • 670February, 2021
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 176May, 2022
  • 129February, 2023
  • 124August, 2017
  • 120May, 2019
  • 118July, 2018
  • 108July, 2019
  • 82November, 2017
  • 80April, 2019
  • 64March, 2020
  • 61November, 2019
  • 47September, 2023
  • 40May, 2024
  • 25February, 2020
  • 19April, 2020
  • 18September, 2020
  • 16January, 2021
  • 16November, 2020
  • 16October, 2018
  • 15May, 2023
  • 10December, 2019
  • 6October, 2017
  • 5April, 2018
  • 5March, 2023
  • 4March, 2019
  • 4October, 2022
  • 3January, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 572bam
  • 559tsv
  • 551bigWig
  • 89txt
  • fastq
  • 23bed narrowPeak
  • 8tagAlign
  • 6csv
  • 4bed bedgraph
  • 2bed bed3
  • 2bed bed3+
Organism
  • 670Homo sapiens
Biosample type
  • 545tissue
  • 96cell line
  • 26in vitro differentiated cells
  • 3primary cell
Organ
  • 455connective tissue
  • 386adipose tissue
  • 150bone element
  • 66artery
  • 66blood vessel
  • 66heart
  • 66vasculature
  • 26epithelium
  • 26pancreas
  • 8kidney
  • 8skeleton
  • 6limb
  • 3liver
Project
  • 670AMP
Genome assembly (visualization)
  • 574hg19
  • 568GRCh38
Lab
  • 670AMP-T2D consortium
Audit category:
  • 128inconsistent ontology term
  • 5audit script error
  • 1inconsistent replicate
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

670 results

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Clear Filters
total RNA-seq
RNA microarray
ATAC-seq
ChIP-seq
single cell RNA-seq
snDrop-seq
pCHi-C
tissue
adipose tissue381
bone element84
bone tissue58
kidney5
visceral abdominal adipose tissue3
subcutaneous adipose tissue2
distal epiphysis1
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
kidney (Cortex-Medulla)1
kidney (cortex)1
kidney (medulla)1
liver1
proximal epiphysis1
proximal epiphysis of femur1
proximal epiphysis of humerus1
proximal epiphysis of tibia1
cell line
smooth muscle cell of the coronary artery5286
EndoC_BH126
HepG211
iPSC derived cell line2
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)18
adipocyte44
primary cell
osteoblast111
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