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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
98
ChIP-seq
Assay category
187
DNA accessibility
98
DNA binding
Target of assay
94
histone
94
histone modification
54
broad histone mark
40
narrow histone mark
control
4
RNA binding protein
4
transcription factor
Date released
667
February, 2021
390
May, 2021
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
176
May, 2022
129
February, 2023
118
July, 2018
105
August, 2017
105
July, 2019
97
May, 2019
70
November, 2017
66
April, 2019
64
March, 2020
59
November, 2019
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
15
May, 2023
14
October, 2018
11
November, 2020
10
December, 2019
5
April, 2018
5
March, 2023
5
October, 2017
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
544
bam
542
bigWig
535
bed narrowPeak
528
bigBed narrowPeak
fastq
261
bed broadPeak
251
bigBed broadPeak
187
bed bed3+
79
tagAlign
3
tar
Organism
285
Homo sapiens
Biosample type
238
tissue
47
primary cell
Organ
105
brain
80
kidney
41
musculature of body
33
heart
32
limb
18
epithelium
18
ureter
15
connective tissue
7
vasculature
6
eye
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
285
AMP
Genome assembly (visualization)
267
GRCh38
193
hg19
Lab
285
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
files.file_type!
fastq
target.investigated_as!
control
BIOSAMPLE
ASSAY
285 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
layer of hippocampus
19
heart
18
brain
12
5
muscle of arm
17
caudate nucleus
1
13
+ See 38 more…
primary cell
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
cardiac muscle cell
1
2
epithelial cell of proximal tubule
1
2
+ See 17 more…
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