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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
ATAC-seq
3
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
5
Transcription
4
DNA accessibility
3
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
118
July, 2018
80
May, 2022
61
May, 2021
55
November, 2019
26
February, 2021
20
August, 2017
19
February, 2023
18
October, 2019
16
October, 2018
14
March, 2020
10
November, 2020
8
January, 2021
6
July, 2019
5
April, 2018
4
August, 2021
4
June, 2019
4
March, 2019
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
Available data
10
bigWig
6
bam
6
tsv
3
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
14
Homo sapiens
Biosample type
9
tissue
5
cell line
Organ
14
pancreas
7
heart
6
epithelium
5
musculature of body
4
blood vessel
4
vasculature
3
liver
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
7
AMP
7
T1D
Genome assembly (visualization)
11
hg19
6
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
files.file_type!
fastq
month_released!
April, 2020
organ_slims!
small intestine
BIOSAMPLE
ASSAY
14 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
2
2
2
pancreas
1
1
1
cell line
EndoC_BH1
2
2
1
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