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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
13
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
6
control
4
broad histone mark
3
narrow histone mark
Date released
118
July, 2018
80
May, 2022
61
May, 2021
55
November, 2019
26
February, 2021
20
August, 2017
19
February, 2023
18
October, 2019
16
October, 2018
14
March, 2020
10
November, 2020
8
January, 2021
6
July, 2019
5
April, 2018
4
August, 2021
4
June, 2019
4
March, 2019
3
October, 2022
2
May, 2019
1
August, 2022
February, 2020
Available data
14
bam
8
bigWig
7
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
18
Homo sapiens
Biosample type
15
cell line
3
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
18
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent assembly
files.file_type!
fastq
month_released!
February, 2020
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
cell line
Panc1
13
1
1
tissue
islet of Langerhans
3
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