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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
12
DNA accessibility
4
Transcription
Target of assay
4
histone
4
histone modification
narrow histone mark
Date released
8
February, 2021
8
February, 2023
1
March, 2020
Available data
8
bam
8
bed narrowPeak
4
bed bed3
4
txt
1
tsv
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
connective tissue
450
pancreas
436
adipose tissue
353
heart
339
kidney
285
liver
246
epithelium
206
vasculature
203
blood vessel
159
bone element
152
brain
135
artery
107
limb
81
musculature of body
58
eye
35
nerve
20
lung
18
ureter
16
skeleton
16
vein
10
embryo
9
blood
9
bodily fluid
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
17
AMP-T2D consortium
files.file_type!
fastq
organ_slims!
connective tissue
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
17 results
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ATAC-seq
total RNA-seq
pCHi-C
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
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