Experiment Matrix

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BIOSAMPLE

	ASSAY
1992 results Clear Filters	ChIP-seq	ATAC-seq	DNase-seq	total RNA-seq	WGBS	snATAC-seq	pCHi-C	Hi-C	RRBS	Capture-C	CRISPR genome editing followed by DNA sequencing	FAIRE-seq	single cell RNA-seq	HiChIP	CRISPR RNA-seq	CRISPR genome editing followed by sgRNA sequencing	CRISPRi RNA-seq	DNAme array	MPRA	RNA microarray	...and 3 more
tissue
kidney	27	75	13			6		1	1			1
islet of Langerhans	43	48				7	4	3	1
liver	78	20			2		1	1
heart left ventricle	35	2	3		4		1	1	1
coronary artery	5	36	2

primary cell
monocyte	85	15		2			1											1
pancreatic alpha cell		22			25			1
CD8-positive, alpha-beta T cell	33	2		2			1
pancreatic beta cell		13			16			1
naive thymus-derived CD4-positive, alpha-beta T cell	2	22					1

in vitro differentiated cells
embryonic stem cell	37	6					1
neural progenitor cell	21	10
adipocyte	14	8								1
Pancreatic progenitors (progenitor cell of endocrine pancreas)		5
cardiomyocytes (cardiac muscle cell)		1					2	2

cell line
EndoC_BH1	15	19						1		2	3			2		1
HepG2	18	1					2	1
Panc1	13		1					1
smooth muscle cell of the coronary artery	6	8
RCC 7860 HIF1a re-expression	4

stem cell
SB Ad3.1															1		1
mesenchymal stem cell							1
mesendoderm							1
neural progenitor cell (neural stem cell)							1
trophoblast							1