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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 25ChIP-seq
Assay category
  • 25DNA binding
Target of assay
  • 787histone
  • 787histone modification
  • 404narrow histone mark
  • 383broad histone mark
  • 175control
  • 60transcription factor
  • 25RNA binding protein
  • 7recombinant protein
  • 5nucleotide modification
Date released
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4June, 2019
  • 1August, 2021
  • 1November, 2019
Available data
  • 106bigWig
  • 105bed narrowPeak
  • 103bam
  • 93bigBed narrowPeak
  • fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 25Homo sapiens
Biosample type
  • 13tissue
  • 5in vitro differentiated cells
  • 5primary cell
  • 2cell line
Organ
  • 11heart
  • 4epithelium
  • 3blood vessel
  • 3kidney
  • 3vasculature
  • 1artery
  • 1connective tissue
  • 1eye
  • 1liver
  • 1pancreas
Project
  • 25AMP
Genome assembly (visualization)
  • 18GRCh38
  • 14hg19
Lab
  • 14AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

25 results

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Clear Filters
ChIP-seq
tissue
left cardiac atrium5
heart left ventricle3
ascending aorta1
coronary artery1
kidney1
in vitro differentiated cells
embryonic stem cell5
primary cell
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
kidney epithelial cell1
retinal pigment epithelial cell1
cell line
EndoC_BH11
HepG21
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