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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 383ChIP-seq
Assay category
  • 383DNA binding
Target of assay
  • 787histone
  • 787histone modification
  • 404narrow histone mark
  • 383broad histone mark
  • 175control
  • 60transcription factor
  • 25RNA binding protein
  • 7recombinant protein
  • 5nucleotide modification
Date released
  • 76May, 2021
  • 60August, 2017
  • 58May, 2019
  • 55October, 2019
  • 42November, 2017
  • 37April, 2019
  • 20May, 2024
  • 9August, 2021
  • 8June, 2019
  • 8October, 2018
  • 6November, 2019
  • 4October, 2017
Available data
  • 427bigWig
  • 420bed narrowPeak
  • 378bam
  • 242bigBed narrowPeak
  • 147tagAlign
  • fastq
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 383Homo sapiens
Biosample type
  • 258tissue
  • 89primary cell
  • 25in vitro differentiated cells
  • 11cell line
Organ
  • 64brain
  • 57heart
  • 45blood vessel
  • 45vasculature
  • 34limb
  • 32connective tissue
  • 26pancreas
  • 21epithelium
  • 20adipose tissue
  • 20musculature of body
  • 17liver
  • 16nerve
  • 15kidney
  • 14artery
  • 9vein
Project
  • 339AMP
  • 44T1D
Genome assembly (visualization)
  • 276GRCh38
  • 254hg19
Lab
  • 288AMP-T2D consortium
  • 74Kyle Gaulton, UCSD
  • 20Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 14inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

383 results

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Clear Filters
ChIP-seq
tissue
left cardiac atrium20
subcutaneous abdominal adipose tissue20
tibial nerve16
heart left ventricle15
liver15
primary cell
monocyte44
CD8-positive, alpha-beta T cell20
endothelial cell of umbilical vein9
mesenchymal stem cell4
skeletal muscle satellite cell4
in vitro differentiated cells
embryonic stem cell10
adipocyte8
neural progenitor cell7
cell line
EndoC_BH16
Panc14
HepG21
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