Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 404ChIP-seq
Assay category
  • 404DNA binding
Target of assay
  • 787histone
  • 787histone modification
  • 404narrow histone mark
  • 383broad histone mark
  • 175control
  • 60transcription factor
  • 25RNA binding protein
  • 7recombinant protein
  • 5nucleotide modification
Date released
  • 141October, 2019
  • 64May, 2021
  • 36August, 2017
  • 34May, 2019
  • 28November, 2017
  • 27May, 2020
  • 23April, 2019
  • 15May, 2024
  • 11August, 2021
  • 11June, 2019
  • 6October, 2018
  • 4November, 2019
  • 3March, 2020
  • 1October, 2017
Available data
  • 440bigWig
  • 429bed narrowPeak
  • 405bam
  • 174tagAlign
  • 149bigBed narrowPeak
  • fastq
  • 29bed broadPeak
  • 14bigBed broadPeak
  • 13bed bed3+
  • 1tagAlign bed3+
Organism
  • 404Homo sapiens
Biosample type
  • 296tissue
  • 75primary cell
  • 22in vitro differentiated cells
  • 11cell line
Organ
  • 113brain
  • 41liver
  • 40heart
  • 25pancreas
  • 24blood vessel
  • 24vasculature
  • 21epithelium
  • 20connective tissue
  • 15kidney
  • 15limb
  • 13musculature of body
  • 11adipose tissue
  • 8nerve
  • 6artery
  • 6vein
  • 4gonad
  • 4ovary
  • 3eye
  • 1lymph node
  • 1pituitary gland
Project
  • 360AMP
  • 44T1D
Genome assembly (visualization)
  • 302GRCh38
  • 302hg19
Lab
  • 327AMP-T2D consortium
  • 60Kyle Gaulton, UCSD
  • 15Patrick T. Ellinor, Broad
  • 2Bing Ren, UCSD
Audit category:
  • 17inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

404 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
liver37
islet of Langerhans29
left cardiac atrium15
subcutaneous abdominal adipose tissue11
kidney10
primary cell
monocyte41
CD8-positive, alpha-beta T cell10
endothelial cell of umbilical vein6
epithelial cell of proximal tubule4
skeletal muscle satellite cell3
in vitro differentiated cells
embryonic stem cell10
neural progenitor cell7
adipocyte4
pancreatic PP cell1
cell line
EndoC_BH16
Panc13
HepG22
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego