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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 60ChIP-seq
Assay category
  • 60DNA binding
Target of assay
  • 787histone
  • 787histone modification
  • 404narrow histone mark
  • 383broad histone mark
  • 175control
  • 60transcription factor
  • 25RNA binding protein
  • 7recombinant protein
  • 5nucleotide modification
Date released
  • 16May, 2021
  • 11August, 2021
  • 7October, 2019
  • 6April, 2019
  • 5February, 2021
  • 5May, 2019
  • 5May, 2024
  • 4June, 2019
  • 1November, 2019
Available data
  • 496bigWig
  • 485bam
  • 469bed narrowPeak
  • fastq
  • 405bigBed narrowPeak
  • 49bed broadPeak
  • 49bigBed broadPeak
  • 19bed bed3+
  • 9tagAlign
  • 3tar
Organism
  • 60Homo sapiens
Biosample type
  • 24cell line
  • 16in vitro differentiated cells
  • 15tissue
  • 5primary cell
Organ
  • 17heart
  • 11liver
  • 10kidney
  • 7blood vessel
  • 7vasculature
  • 5artery
  • 5epithelium
  • 2pancreas
  • 1connective tissue
  • 1eye
Project
  • 60AMP
Genome assembly (visualization)
  • 42hg19
  • 36GRCh38
Lab
  • 32AMP-T2D consortium
  • 12Kyle Gaulton, UCSD
  • 11Bing Ren, UCSD
  • 5Patrick T. Ellinor, Broad
Audit category:
  • 14inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

60 results

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Clear Filters
ChIP-seq
cell line
HepG211
smooth muscle cell of the coronary artery4
RCC 7860 HIF1a re-expression3
RCC 7860 HIF2a over-expression2
RCC 7860 vector2
in vitro differentiated cells
embryonic stem cell12
cardiomyocytes3
pancreatic PP cell1
tissue
heart left ventricle5
left cardiac atrium5
ascending aorta1
coronary artery1
kidney1
primary cell
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
kidney epithelial cell1
retinal pigment epithelial cell1
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