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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
27
total RNA-seq
25
ATAC-seq
4
single cell RNA-seq
Assay category
32
DNA binding
31
Transcription
25
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
312
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
94
December, 2017
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
73
fastq
72
bam
72
bigWig
46
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
88
Homo sapiens
Biosample type
73
primary cell
15
tissue
Organ
72
pancreas
61
epithelium
14
kidney
1
adipose tissue
1
connective tissue
Project
88
AMP
Genome assembly (visualization)
84
GRCh38
73
hg19
Lab
74
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
32
missing controlled_by
files.file_type!
hdf5
tagAlign bed3+
month_released!
November, 2018
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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tissue
kidney
11
3
adipose tissue
1
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