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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
199
histone modification
198
histone
broad histone mark
88
narrow histone mark
75
transcription factor
54
control
10
RNA binding protein
5
chromatin remodeller
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
75
bam
75
bigWig
75
fastq
52
bed narrowPeak
30
bigBed narrowPeak
19
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
75
Homo sapiens
Biosample type
26
tissue
25
cell line
22
in vitro differentiated cells
2
primary cell
Organ
34
connective tissue
25
blood
25
bodily fluid
12
adipose tissue
7
pancreas
4
liver
3
spleen
Project
75
AMP
Genome assembly (visualization)
75
hg19
74
GRCh38
Lab
75
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
23
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
hdf5
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
7
liver
4
spleen
3
cell line
GM12878
25
in vitro differentiated cells
adipocyte
22
primary cell
skeletal muscle myoblast
2
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