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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 44total RNA-seq
  • 18small RNA-seq
  • 15RRBS
  • 12WGBS
  • 6ATAC-seq
  • 4Hi-C
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 65Transcription
  • 27DNA methylation
  • 8DNA accessibility
  • 43D chromatin structure
Target of assay
  • 3control
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 313October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 104July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 85bigWig
  • 82bam
  • 65tsv
  • 23bed bedMethyl
  • 23bigBed bedMethyl
  • 7bed narrowPeak
  • 4bed bed3+
  • hdf5
  • 2bigBed narrowPeak
Organism
  • 104Homo sapiens
Biosample type
  • 77tissue
  • 27primary cell
Organ
  • 25heart
  • 17connective tissue
  • 15brain
  • 12adipose tissue
  • 11epithelium
  • 11kidney
  • 10musculature of body
  • 10vasculature
  • 9blood vessel
  • 9liver
  • 6pancreas
  • 5limb
  • 3artery
  • 2pericardium
  • 1eye
Project
  • 104AMP
Genome assembly (visualization)
  • 87hg19
  • 79GRCh38
Lab
  • 104AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • hdf5
BIOSAMPLE
ASSAY

104 results

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Clear Filters
total RNA-seq
small RNA-seq
RRBS
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle2142
omental fat pad41
right lobe of liver221
subcutaneous adipose tissue41
body of pancreas22
gastrocnemius medialis4
heart211
frontal cortex111
liver21
right atrium auricular region21
thoracic aorta21
aorta2
diencephalon11
heart right ventricle2
kidney11
metanephros11
occipital lobe11
parietal lobe11
skeletal muscle tissue11
temporal lobe11
ascending aorta1
brain1
cerebellum1
cerebellum (Hemisphere)1
coronary artery1
islet of Langerhans1
muscle of leg1
pancreas1
pericardium1
posterior cingulate cortex1
right cardiac atrium1
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
mesenchymal stem cell of adipose11
renal cortical epithelial cell11
skeletal muscle satellite cell11
Purkinje cell1
cardiac atrium fibroblast1
cardiac fibroblast1
cardiac muscle cell1
cardiac ventricle fibroblast1
choroid plexus epithelial cell1
endothelial cell of coronary artery1
glomerular endothelial cell1
hepatocyte1
mesangial cell1
pericardium fibroblast1
retinal pigment epithelial cell1
skeletal muscle cell1
skeletal muscle myoblast1
smooth muscle cell of the coronary artery1
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