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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 44total RNA-seq
  • 18small RNA-seq
  • 15RRBS
  • 12WGBS
  • 6ATAC-seq
  • 4Hi-C
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 65Transcription
  • 27DNA methylation
  • 8DNA accessibility
  • 43D chromatin structure
Target of assay
  • 3control
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 313October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 104July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 85bigWig
  • 82bam
  • 65tsv
  • 23bed bedMethyl
  • 23bigBed bedMethyl
  • 7bed narrowPeak
  • 4bed bed3+
  • hdf5
  • 2bigBed narrowPeak
Organism
  • 104Homo sapiens
Biosample type
  • 77tissue
  • 27primary cell
Organ
  • 25heart
  • 17connective tissue
  • 15brain
  • 12adipose tissue
  • 11epithelium
  • 11kidney
  • 10musculature of body
  • 10vasculature
  • 9blood vessel
  • 9liver
  • 6pancreas
  • 5limb
  • 3artery
  • 2pericardium
  • 1eye
Project
  • 104AMP
Genome assembly (visualization)
  • 87hg19
  • 79GRCh38
Lab
  • 104AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • hdf5
BIOSAMPLE
ASSAY

104 results

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Clear Filters
total RNA-seq
small RNA-seq
RRBS
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle2142
omental fat pad41
right lobe of liver221
subcutaneous adipose tissue41
body of pancreas22
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
mesenchymal stem cell of adipose11
renal cortical epithelial cell11
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