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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
7
WGBS
6
ChIP-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
10
DNA accessibility
7
DNA methylation
6
DNA binding
1
Transcription
Target of assay
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
670
February, 2021
358
May, 2021
341
May, 2020
335
August, 2017
302
August, 2021
271
October, 2019
196
June, 2019
158
November, 2017
145
February, 2023
135
July, 2018
120
May, 2022
111
May, 2019
93
July, 2019
74
April, 2019
59
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
35
December, 2017
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2019
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
7
December, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
24
fastq
23
bam
17
bigWig
10
bed narrowPeak
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
24
Homo sapiens
Biosample type
19
tissue
4
cell line
1
primary cell
Organ
7
pancreas
6
spleen
4
liver
3
blood
3
bodily fluid
2
brain
1
adipose tissue
1
connective tissue
Project
24
AMP
Genome assembly (visualization)
16
GRCh38
10
hg19
Lab
24
AMP-T2D consortium
files.file_type!
hdf5
organ_slims!
epithelium
skeleton
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
24 results
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Clear Filters
DNase-seq
WGBS
ChIP-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
1
2
3
body of pancreas
2
2
pancreas
2
1
brain
2
liver
2
+ See 2 more…
cell line
GM12878
3
HepG2
1
primary cell
pancreatic cell
1
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