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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
48
snATAC-seq
47
WGBS
42
ATAC-seq
Assay category
177
Transcription
90
DNA accessibility
47
DNA methylation
Date released
134
May, 2022
76
February, 2023
59
September, 2020
45
February, 2021
August, 2020
Available data
162
fastq
153
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
bigWig
3
cool
hic
Organism
314
Homo sapiens
Biosample type
314
primary cell
Organ
142
epithelium
142
pancreas
Project
314
HPAP
Genome assembly (visualization)
3
GRCh38
Lab
3896
AMP-T2D consortium
343
Kyle Gaulton, UCSD
314
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
47
KPMP
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
36
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
files.file_type!
hic
lab.title!
Karen Mohlke, UNC
Maike Sander, UCSD
month_released!
August, 2020
BIOSAMPLE
ASSAY
314 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
31
24
pancreatic beta cell
11
16
14
exocrine cell
39
pancreatic acinar cell
4
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