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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
73
single cell RNA-seq
49
ATAC-seq
41
WGBS
21
snATAC-seq
Assay category
165
Transcription
70
DNA accessibility
41
DNA methylation
Date released
134
May, 2022
76
February, 2023
59
September, 2020
February, 2021
7
August, 2020
Available data
153
zippedFastqFolder
124
fastq
10
bigWig
3
bedpe bed3+
3
cool
hic
Organism
276
Homo sapiens
Biosample type
276
primary cell
Organ
143
epithelium
143
pancreas
Project
276
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3002
AMP-T2D consortium
342
Kyle Gaulton, UCSD
276
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
36
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
3
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
files.file_type!
hic
month_released!
February, 2021
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
276 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
primary cell
pancreatic alpha cell
42
29
25
Langerhans cell
73
21
pancreatic beta cell
11
16
16
exocrine cell
39
pancreatic acinar cell
4
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