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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
2
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
Date released
150
February, 2021
8
February, 2023
October, 2019
1
March, 2020
1
May, 2021
Available data
88
txt
66
bam
59
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
Organism
160
Homo sapiens
Biosample type
159
tissue
1
primary cell
Organ
921
pancreas
782
liver
680
connective tissue
490
adipose tissue
484
epithelium
383
heart
323
kidney
200
brain
187
vasculature
181
blood vessel
159
bone element
115
artery
94
musculature of body
69
blood
69
bodily fluid
53
limb
40
eye
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
159
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
159
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
hic
month_released!
October, 2019
BIOSAMPLE
ASSAY
160 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
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