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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
1
Hi-C
Assay category
115
DNA binding
1
3D chromatin structure
Target of assay
67
transcription factor
25
histone
25
histone modification
21
control
14
broad histone mark
11
narrow histone mark
6
RNA binding protein
5
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
397
May, 2021
341
May, 2020
310
October, 2019
309
August, 2021
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
81
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
26
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
116
fastq
115
bam
94
bed narrowPeak
94
bigWig
80
bigBed narrowPeak
12
bed bed3+
Organism
116
Homo sapiens
Biosample type
55
tissue
30
in vitro differentiated cells
28
cell line
3
stem cell
Organ
64
liver
27
blood
27
bodily fluid
19
epithelium
embryo
7
spleen
Project
116
AMP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
116
AMP-T2D consortium
Audit category:
28
inconsistent control
Audit category:
8
inconsistent control read length
files.file_type!
hic
organ_slims!
embryo
BIOSAMPLE
ASSAY
116 results
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Clear Filters
ChIP-seq
Hi-C
tissue
liver
38
right lobe of liver
10
spleen
7
in vitro differentiated cells
hepatocyte
15
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
cell line
GM12878
27
HepG2
1
stem cell
hESC
3
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