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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
3
pCHi-C
2
DNase-seq
1
FAIRE-seq
Assay category
17
DNA binding
3
DNA accessibility
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
20
October, 2019
3
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
3
tsv
2
bed bed3+
hic
1
bedpe bed3+
1
tar
Organism
23
Homo sapiens
Biosample type
20
primary cell
2
tissue
1
cell line
Organ
939
pancreas
789
liver
684
connective tissue
518
epithelium
491
adipose tissue
390
heart
353
kidney
286
brain
233
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
15
hg19
12
GRCh38
Lab
23
AMP-T2D consortium
files.file_type!
hic
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
pCHi-C
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
tissue
sigmoid colon
1
small intestine
1
cell line
MCF-7
1
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