Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
DNase-seq
10
snATAC-seq
9
single cell RNA-seq
3
pCHi-C
Assay category
28
DNA accessibility
9
Transcription
Date released
19
April, 2020
18
June, 2019
2
March, 2020
1
May, 2021
Available data
18
bam
18
bed bed3+
18
bed broadPeak
18
bed narrowPeak
18
bigBed broadPeak
18
bigBed narrowPeak
18
bigWig
2
tsv
Organism
39
Homo sapiens
Biosample type
40
tissue
Organ
939
pancreas
789
liver
684
connective tissue
518
epithelium
491
adipose tissue
390
heart
353
kidney
286
brain
233
vasculature
227
blood vessel
159
bone element
artery
122
limb
94
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
19
LungMap
1
T1D
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
20
AMP-T2D consortium
19
Xin Sun, UCSD
1
Kyle Gaulton, UCSD
files.file_type!
hic
organ_slims!
artery
BIOSAMPLE
ASSAY
40 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
snATAC-seq
single cell RNA-seq
pCHi-C
tissue
lung
10
9
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
thymus
2
Download