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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
11
total RNA-seq
1
Hi-C
Assay category
47
DNA binding
11
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
10
histone
10
histone modification
9
control
5
broad histone mark
5
narrow histone mark
2
RNA binding protein
chromatin remodeller
Date released
715
February, 2021
408
August, 2017
397
May, 2021
391
November, 2017
341
May, 2020
314
October, 2019
311
August, 2021
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
81
November, 2018
80
April, 2019
78
December, 2017
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
33
December, 2018
26
February, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
59
fastq
58
bam
49
bigWig
38
bed narrowPeak
28
bigBed narrowPeak
11
tsv
Organism
59
Homo sapiens
Biosample type
26
cell line
26
in vitro differentiated cells
7
tissue
Organ
25
blood
25
bodily fluid
embryo
7
spleen
1
liver
Project
59
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
59
AMP-T2D consortium
Audit category:
2
inconsistent control read length
files.file_type!
ibed
organ_slims!
embryo
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
cell line
GM12878
25
HepG2
1
in vitro differentiated cells
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
primitive gut cell
3
2
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tissue
spleen
7
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