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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ATAC-seq
17
ChIP-seq
7
total RNA-seq
1
Hi-C
Assay category
17
DNA accessibility
17
DNA binding
7
Transcription
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
transcription factor
1
RNA binding protein
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
25
bam
21
bigWig
15
bed narrowPeak
7
tsv
3
tagAlign
1
bedpe bed3+
1
hic
Organism
42
Homo sapiens
Biosample type
37
cell line
5
in vitro differentiated cells
Organ
116
pancreas
42
epithelium
3
connective tissue
3
heart
2
embryo
1
adipose tissue
1
bone element
1
bone marrow
1
thymus
Project
41
AMP
1
T1D
Genome assembly (visualization)
23
hg19
22
GRCh38
Lab
42
AMP-T2D consortium
Audit category:
38
inconsistent ontology term
files.file_type!
ibed
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
Hi-C
cell line
EndoC_BH1
17
14
5
1
in vitro differentiated cells
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
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