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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
28
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
106
DNA binding
29
Transcription
14
DNA accessibility
Target of assay
62
histone
62
histone modification
36
broad histone mark
29
control
26
narrow histone mark
15
transcription factor
11
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
62
March, 2020
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
148
bam
133
fastq
119
bigWig
91
bed narrowPeak
59
bigBed narrowPeak
28
tsv
1
csv
Organism
149
Homo sapiens
Biosample type
75
primary cell
74
tissue
Organ
125
pancreas
63
epithelium
23
adipose tissue
23
connective tissue
Project
149
AMP
Genome assembly (visualization)
119
GRCh38
119
hg19
Lab
149
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
ibed
month_released!
July, 2018
November, 2019
BIOSAMPLE
ASSAY
149 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
4
3
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
See all biosamples
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