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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Date released
326
November, 2017
249
October, 2019
237
August, 2017
218
June, 2019
200
May, 2022
189
February, 2023
172
August, 2021
148
February, 2021
136
May, 2021
120
May, 2019
102
May, 2020
94
December, 2017
85
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
9
October, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
85
bigWig
82
bam
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
43
Homo sapiens
Biosample type
30
tissue
13
primary cell
Organ
14
heart
8
epithelium
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
43
AMP
Genome assembly (visualization)
26
hg19
14
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
tagAlign
tsv
month_released!
September, 2018
target.investigated_as!
other context
BIOSAMPLE
ASSAY
43 results
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Clear Filters
RRBS
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
kidney
1
1
+ See 13 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
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