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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
136
histone
136
histone modification
70
broad histone mark
66
narrow histone mark
50
control
18
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
28
August, 2017
15
September, 2018
11
October, 2018
4
November, 2019
3
March, 2020
3
October, 2019
1
May, 2019
1
May, 2021
Available data
69
bigWig
67
bam
59
bed narrowPeak
48
fastq
19
bigBed narrowPeak
tagAlign
6
bed bed3+
4
bed broadPeak
Organism
66
Homo sapiens
Biosample type
31
primary cell
26
tissue
9
cell line
Organ
66
pancreas
63
brain
46
epithelium
40
heart
26
connective tissue
26
vasculature
25
blood vessel
20
liver
15
kidney
15
limb
9
adipose tissue
8
embryo
8
musculature of body
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
Project
62
AMP
4
T1D
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
66
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
tagAlign
tsv
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
tissue
islet of Langerhans
12
body of pancreas
6
endocrine pancreas
6
pancreas
2
cell line
EndoC_BH1
6
Panc1
3
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