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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
19
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
broad histone mark
11
control
8
narrow histone mark
Date released
26
October, 2019
1
February, 2020
Available data
26
bam
15
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
851
pancreas
681
liver
630
connective tissue
474
epithelium
467
adipose tissue
330
heart
277
kidney
185
vasculature
179
blood vessel
143
brain
121
artery
88
limb
71
bone element
69
blood
bodily fluid
68
musculature of body
61
eye
33
embryo
27
nerve
21
spleen
20
lung
18
ureter
13
vein
12
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
27
AMP-T2D consortium
files.file_type!
tagAlign
txt
organ_slims!
bodily fluid
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
19
5
2
1
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